WebAfter Map with BWA-MEM run successfully, it provides the following message "Generating BWA index with is algorithm [bwa_index] Pack FASTA... 45.22 sec [bwa_index] … WebMay 19, 2024 · [bwa_index] Construct BWT for the packed sequence... [bwa_index] 0.07 seconds elapse. [bwa_index] Update BWT... 0.00 sec [bwa_index] Pack forward-only FASTA... 0.01 sec [bwa_index] Construct SA from BWT and Occ... 0.05 sec [main] Version: 0.7.17-r1188 [main] CMD: bwa index reference/ref.fa

Segmentation fault (core dumped) when indexing hg19, hg38 #19 - GitHub

Web[bwa_index] Construct BWT for the packed sequence... Aborted [bwt_restore_sa] fail to open file 'localref.fa.sa' : No such file or directory. What thing I have to do to solve this … Web[bwa_index] Pack FASTA... 0.93 sec [bwa_index] Construct BWT for the packed sequence... [BWTIncCreate] textLength=267594844, availableWord=30828588 [BWTIncConstructFromPacked] 10 iterations … lockwood villas buffalo

[markdup] error reading header · Issue #499 · tseemann/snippy

WebMar 17, 2015 · [bwa_index] Pack FASTA... 0.58 sec [bwa_index] Construct BWT for the packed sequence... [bwa_index] 23.55 seconds elapse. [bwa_index] Update BWT... 0.40 sec [bwa_index] Pack forward-only FASTA... 0.34 sec [bwa_index] Construct SA from BWT and Occ... 11.21 sec [main] Version: 0.7.10-r876-dirty [main] CMD: bwa index -a is … WebApr 22, 2024 · [bwa_index] Construct BWT for the packed sequence... [bwa_index] 1.10 seconds elapse. [bwa_index] Update BWT... 0.03 sec [bwa_index] Pack forward-only FASTA... 0.06 sec [bwa_index] Construct SA from BWT and Occ... 0.34 sec [main] Version: 0.7.17-r1188 WebAug 1, 2024 · [bwa_index] Construct BWT for the packed sequence... [bwa_index] 0.11 seconds elapse. [bwa_index] Update BWT... 0.00 sec [bwa_index] Pack forward-only FASTA... 0.00 sec [bwa_index] Construct SA from BWT and Occ... 0.05 sec [main] Version: 0.7.12-r1039 [main] CMD: bwa index reference/ref.fa indigo productions llc